The detailed information of tRNA gene sequence


Sequence ID>C08008051
Genome IDCP000409
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia canadensis str. McKiel [CP000409]
Start position on genome 109832
End posion on genome 109908
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tctcaattat
tRNA gene sequence 
TGCGGGGTGGAGCAGTTCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTTGGTTCAAA
TCCAGCCCCCGCTACCA
Downstream region at tRNA end position 
tattttatat
Secondary structure (Cloverleaf model)
>C08008051	Met	CAT
                   t      ACCA tattttatat
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | + | | |     A
    T       C G A G       G T T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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