The detailed information of tRNA gene sequence


Sequence ID>C08008066
Genome IDCP000409
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia canadensis str. McKiel [CP000409]
Start position on genome 1002221
End posion on genome 1002148
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caaatgaaaa
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGTTAGAGCCCGCCGCTCATAACGGTGTGGTCGTAGGTTCAAG
TCCTACCAGCCCCAcca
Downstream region at tRNA end position 
cacaagtatt
Secondary structure (Cloverleaf model)
>C08008066	Met	CAT
                   a      Acca cacaagtatt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     TGGTC
                    C - G
                    G + T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK