The detailed information of tRNA gene sequence


Sequence ID>C08008375
Genome IDCP000848
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia rickettsii str. 'Sheila Smith' [CP000848]
Start position on genome 1246272
End posion on genome 1246201
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
atattaatat
tRNA gene sequence 
GCCGGATTAGCTCAGTGGTAGAGCAACCGCCTTGTAAGCGGTAGGTCATCAGTTCAAATC
CGATATCCGGCAcca
Downstream region at tRNA end position 
tcaaaatttt
Secondary structure (Cloverleaf model)
>C08008375	Thr	TGT
                   t      Acca tcaaaatttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T A G C C     A
        G A        A      | | |   |     A
      T     C T C G       A T C A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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