The detailed information of tRNA gene sequence


Sequence ID>C08004175
Genome IDCP000830
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesDinoroseobacter shibae DFL 12 = DSM 16493 [CP000830]
Start position on genome 1242383
End posion on genome 1242468
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
agaggggcgt
tRNA gene sequence 
GCGGGCGTGATGGAATGGTAGACATATCGGACTTAAAATCCGAAGGCCCTAGTGCCGTGT
GGGTTCGAGTCCCACCGCCCGTACCA
Downstream region at tRNA end position 
cgcccctgac
Secondary structure (Cloverleaf model)
>C08004175	Leu	TAA
                   t      ACCA cgcccctgac
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    G       G G T A       G T G G G     C
    G         | | |                 T T
    T       A C A T
      A G          A     AGGCCCTAGTGCCGT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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