The detailed information of tRNA gene sequence


Sequence ID>C08004206
Genome IDCP000830
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesDinoroseobacter shibae DFL 12 = DSM 16493 [CP000830]
Start position on genome 77943
End posion on genome 77870
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gccattcggt
tRNA gene sequence 
CGGGCTGTAGCGCAGCCTGGTAGCGCACCTGCTTCGGGAGCAGGGGGTCGGAGGTTCGAA
TCCTCTCAGCCCGAcca
Downstream region at tRNA end position 
aatggttccc
Secondary structure (Cloverleaf model)
>C08004206	Pro	CGG
                   t      Acca aatggttccc
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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