The detailed information of tRNA gene sequence


Sequence ID>C08004202
Genome IDCP000830
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesDinoroseobacter shibae DFL 12 = DSM 16493 [CP000830]
Start position on genome 1021821
End posion on genome 1021735
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acccgtcggc
tRNA gene sequence 
GGAGACGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTAGGCGGGAAACCGTC
TCGTGGGTTCGAATCCCATCGTCTCCGcca
Downstream region at tRNA end position 
cttgccctag
Secondary structure (Cloverleaf model)
>C08004202	Ser	GCT
                   c      Gcca cttgccctag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAAACCGTCTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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