The detailed information of tRNA gene sequence


Sequence ID>C08008253
Genome IDCP000683
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia massiliae MTU5 [CP000683]
Start position on genome 1130411
End posion on genome 1130502
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgccataact
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCCGAAGGCGGCGGTTTGCTAAACCGTTATACGGGTCATACCG
TATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
atctagacag
Secondary structure (Cloverleaf model)
>C08008253	Ser	GCT
                   t      GCCA atctagacag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATACGGGTCATACCGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK