The detailed information of tRNA gene sequence


Sequence ID>C08008266
Genome IDCP000683
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia massiliae MTU5 [CP000683]
Start position on genome 762949
End posion on genome 762876
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aaaattataa
tRNA gene sequence 
GGGTGATTAGCTCAGTTGGTTAGAGCATTACGTTGACGTCGTAAAGGTAAGAGGTTCGAA
TCCTCTATCGCCCAcca
Downstream region at tRNA end position 
ccttatctcc
Secondary structure (Cloverleaf model)
>C08008266	Val	GAC
                   a      Acca ccttatctcc
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     A - T
                     T - A          T A
                    T     T C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTA
                    T - A
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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