The detailed information of tRNA gene sequence


Sequence ID>W141240749
Genome IDCAGS01000010
Search identical group
Phylum/ClassThermomicrobiota
SpeciesNitrolancea hollandica Lb [CAGS]
Start position on genome 3878
End posion on genome 3792
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acaacaacgc
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTTAAGGCGGCTGTCTTGAAAACAGTTGGGTGATGAGCCCCG
GGGGTTCGAATCCCTCCCTCTCCGCCG
Downstream region at tRNA end position 
gaagcgcact
Secondary structure (Cloverleaf model)
>W141240749	Ser	TGA
                   c      GCCG gaagcgcact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGGGTGATGAGCCCC
                    G + T
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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