The detailed information of tRNA gene sequence


Sequence ID>W141240758
Genome IDCAGS01000032
Search identical group
Phylum/ClassThermomicrobiota
SpeciesNitrolancea hollandica Lb [CAGS]
Start position on genome 8362
End posion on genome 8270
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcctcgtcct
tRNA gene sequence 
GGAAGGGTCGCATAGCTTGGCCGAGTGCGCGCGACTGGAAATCGCGTAGGCGTGATGAGC
GCCTCGAGGGTTCGAATCCCTCCCCTTCCGCCA
Downstream region at tRNA end position 
gatcgctcgt
Secondary structure (Cloverleaf model)
>W141240758	Ser	GGA
                   t      GCCA gatcgctcgt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        C      | | | | |     G
  T         T A C G       G A G G G     C
  G         + | | |                 T T
  G         G T G C
    C C G A        G     TAGGCGTGATGAGCGCCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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