The detailed information of tRNA gene sequence


Sequence ID>W141240798
Genome IDCAGS01000562
Search identical group
Phylum/ClassThermomicrobiota
SpeciesNitrolancea hollandica Lb [CAGS]
Start position on genome 162
End posion on genome 87
Amino Acid Pseudo
Anticodon GAC
Upstream region at tRNA start position 
gtttcacccc
tRNA gene sequence 
CAACCCCTAGCTCATCTGGGAGAGCGCCATCGTGACATGGTGGAGGCAGGTGGTTCGAAC
CCACCGGGGTTGACCG
Downstream region at tRNA end position 
ttggttttat
Secondary structure (Cloverleaf model)
>W141240798	Pseudo	GAC
                   c      ACCG ttggttttat
                     C - G
                     A - T
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G          C A
                    T     C C A C C     A
      C T A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCA
                    C - G
                    C - G
                    A - T
                    T + G
                    C - G
                  G       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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