The detailed information of tRNA gene sequence


Sequence ID>W141240803
Genome IDCAGS01000717
Search identical group
Phylum/ClassThermomicrobiota
SpeciesNitrolancea hollandica Lb [CAGS]
Start position on genome 293
End posion on genome 369
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggaacgttat
tRNA gene sequence 
AGGGTCGTAGCTCAATTTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCGGGTTCGAG
TCCTGCCGGCCCTGCCA
Downstream region at tRNA end position 
cctcccccgg
Secondary structure (Cloverleaf model)
>W141240803	Trp	CCA
                   t      GCCA cctcccccgg
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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