The detailed information of tRNA gene sequence


Sequence ID>C08000339
Genome IDAP009384
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAzorhizobium caulinodans ORS 571 [AP009384]
Start position on genome 1285115
End posion on genome 1285024
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgcggcgcac
tRNA gene sequence 
GGAGGAGAAGCGTCCCTGGTGGGGCGTCCGGACTTCAAATCCGGGAGGGGCCGCGAGCCG
GTCCTTGGTGGGTTCGACTCCCACTCTCTTCCgcca
Downstream region at tRNA end position 
ctttccccga
Secondary structure (Cloverleaf model)
>C08000339	SeC	TCA
                   c      gcca ctttccccga
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    A     C A C C C     A
      T C C        G      | | | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          T     GAGGGGCCGCGAGCCGGTCCTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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