The detailed information of tRNA gene sequence


Sequence ID>W141241941
Genome IDCAHT01000100
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesCandidatus Methylacidiphilum fumarolicum SolV [CAHT]
Start position on genome 3592
End posion on genome 3517
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttggatatat
tRNA gene sequence 
GGGGTCTTAGCACAGTTGGTAGAGCGCCTCAATGGCATTGAGGAGGTCAGGGGTTCTAAT
CCCCTAGGCTCCACCA
Downstream region at tRNA end position 
tattgactta
Secondary structure (Cloverleaf model)
>W141241941	Ala	GGC
                   t      ACCA tattgactta
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      T G A        A      | | | | |     T
    T       C A C G       A G G G G     C
    G       |   | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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