The detailed information of tRNA gene sequence


Sequence ID>C08004129
Genome IDCP000859
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfosudis oleivorans Hxd3 [CP000859]
Start position on genome 2690342
End posion on genome 2690439
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
caacggatgc
tRNA gene sequence 
GGAAGTGCGCAGCGTTCTGGTGATGCTCCCGGACTTCAAATCCGGTGTGGGGCGCTAACA
CCGTCCCGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
tatgttttcc
Secondary structure (Cloverleaf model)
>C08004129	SeC	TCA
                   c      GCCA tatgttttcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    G     T A C C C     A
      C T T        C      + | | | |     G
    T       G C G A       G T G G G     C
    G       + | | |                 T T
    G       T G C T
      T G A        C     TGTGGGGCGCTAACACCGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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