The detailed information of tRNA gene sequence


Sequence ID>C08005367
Genome IDCP000875
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus DSM 785 [CP000875]
Start position on genome 3389714
End posion on genome 3389642
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
accgacaagc
tRNA gene sequence 
GGGGGCGTAGCTCACCTGGTAGAGCGCGACAATCGCACTGTCGAGGTAAGGGGTTCGAGT
CCCCTCGCCTCCAcca
Downstream region at tRNA end position 
acttgcttgg
Secondary structure (Cloverleaf model)
>C08005367	Ala	CGC
                   c      Acca acttgcttgg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T C C C C     A
      C C A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTA
                    C - G
                    G - C
                    A - T
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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