The detailed information of tRNA gene sequence


Sequence ID>C08005368
Genome IDCP000875
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus DSM 785 [CP000875]
Start position on genome 3389611
End posion on genome 3389539
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aaatcgatat
tRNA gene sequence 
GGGGGTGTAGCTCACTTGGTAGAGCGTCGCAATGGCATTGCGAAGGTAAGGGGTTCGATC
CCCCTCACCTCCAcca
Downstream region at tRNA end position 
aatcaactca
Secondary structure (Cloverleaf model)
>C08005368	Ala	GGC
                   t      Acca aatcaactca
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          C T
                    T     T C C C C     A
      T C A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTA
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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