The detailed information of tRNA gene sequence


Sequence ID>C08005356
Genome IDCP000875
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus DSM 785 [CP000875]
Start position on genome 5890937
End posion on genome 5891022
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
acatcaataa
tRNA gene sequence 
GCCGAAGTGGCGGAATGGCAGACGCGATGGTCTCAAAAACCATTGAGGGCAACCTCATGT
GGGTTCGACTCCCACCTTCGGCACCA
Downstream region at tRNA end position 
aattgatcaa
Secondary structure (Cloverleaf model)
>C08005356	Leu	CAA
                   a      ACCA aattgatcaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T C
                    T     C A C C C     A
      T A A        G      | | | | |     G
    G       G G C G       G T G G G     C
    G         | | |                 T T
    C       A C G C
      A G          G     TGAGGGCAACCTCAT
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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