The detailed information of tRNA gene sequence


Sequence ID>C08005329
Genome IDCP000875
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus DSM 785 [CP000875]
Start position on genome 82592
End posion on genome 82668
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
taagcgttgt
tRNA gene sequence 
CGGGGCGTGGCTCAGCCCGGTAGAGCGCAGCGTTCGGGACGCTGAGGTCGGAGGTTCGAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
ccaatcaccg
Secondary structure (Cloverleaf model)
>C08005329	Pro	CGG
                   t      ACCA ccaatcaccg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     G
    C       C T C G       G G A G G     C
    C       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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