The detailed information of tRNA gene sequence


Sequence ID>C08005346
Genome IDCP000875
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus DSM 785 [CP000875]
Start position on genome 3445699
End posion on genome 3445774
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acaaaagcaa
tRNA gene sequence 
CGGGGTGTAGCGCAGTTGGTAGCGCGCGACGTTTGGGACGTTGAGGTCGTAGGTTCGAAT
CCTATCACCCCGACCA
Downstream region at tRNA end position 
ctacaacgag
Secondary structure (Cloverleaf model)
>C08005346	Pro	TGG
                   a      ACCA ctacaacgag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T A T C C     A
      T G A        A      + | | | |     G
    T       C G C G       G T A G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    C - G
                    G + T
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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