The detailed information of tRNA gene sequence


Sequence ID>C08005338
Genome IDCP000875
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus DSM 785 [CP000875]
Start position on genome 897476
End posion on genome 897566
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcggcgcac
tRNA gene sequence 
GGGTGGGTCGCATAGTTGGTCGAGTGCGCGGCACTGGAAATGCCGTAGGGTGTCAAAGCT
CTCGAGGGTTCGAATCCCTCTCCACCCGCCA
Downstream region at tRNA end position 
aatcacacgc
Secondary structure (Cloverleaf model)
>C08005338	Ser	GGA
                   c      GCCA aatcacacgc
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G A G G G     C
  G         + | | |                 T T
  T         G T G C
    C G A          G     TAGGGTGTCAAAGCTCTC
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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