The detailed information of tRNA gene sequence


Sequence ID>C08005344
Genome IDCP000875
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus DSM 785 [CP000875]
Start position on genome 1766740
End posion on genome 1766829
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccatagatac
tRNA gene sequence 
GGGAAGGTGGCTGAGTGGACGAAAGCAACGGTTTGCTAAACCGTCGAGGGGTCACACCCT
CCGAGGGTTCGAATCCCTCCCTTCCCGCCA
Downstream region at tRNA end position 
aacaacaacg
Secondary structure (Cloverleaf model)
>C08005344	Ser	GCT
                   c      GCCA aacaacaacg
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    A       A A G C
      C G A        A     CGAGGGGTCACACCCTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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