The detailed information of tRNA gene sequence


Sequence ID>C08005362
Genome IDCP000875
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus DSM 785 [CP000875]
Start position on genome 5582935
End posion on genome 5582864
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ctcgcgttaa
tRNA gene sequence 
GCCGCATTAGCTCAGTGGTAGAGCAACCGCCTTGTAAGTGGTAGGTCATCGGTTCAAGTC
CGATATGCGGCTcca
Downstream region at tRNA end position 
aacatcaaag
Secondary structure (Cloverleaf model)
>C08005362	Thr	TGT
                   a      Tcca aacatcaaag
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T G
                    T     T A G C C     A
        G A        A      | | | | |     A
      T     C T C G       A T C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    A - T
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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