The detailed information of tRNA gene sequence


Sequence ID>C08005375
Genome IDCP000875
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus DSM 785 [CP000875]
Start position on genome 486214
End posion on genome 486142
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tcaatcagat
tRNA gene sequence 
GGGTGATTAGCTCAGTTGGTAGAGCGTCTCGTTTACACCGAGTAGGTCGGGGGTTCGAGT
CCCTCATCACCCAcca
Downstream region at tRNA end position 
atgccacttt
Secondary structure (Cloverleaf model)
>C08005375	Val	TAC
                   t      Acca atgccacttt
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T   T
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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