The detailed information of tRNA gene sequence


Sequence ID>C08005348
Genome IDCP000875
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus DSM 785 [CP000875]
Start position on genome 4144343
End posion on genome 4144418
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcattctgt
tRNA gene sequence 
GCCGATGTAGCTCAGGGGTTAGAGCGAACGACTCATAATCGTTAGGTCACTGGTTCAATT
CCAGTCATCGGCACCA
Downstream region at tRNA end position 
tttttttatt
Secondary structure (Cloverleaf model)
>C08005348	Met	CAT
                   t      ACCA tttttttatt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T G A C C     A
      G G A        A      | | | | |     A
    G       C T C G       A C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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