The detailed information of tRNA gene sequence


Sequence ID>C08002399
Genome IDCP000909
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexus aurantiacus J-10-fl [CP000909]
Start position on genome 3023494
End posion on genome 3023587
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatcgctggt
tRNA gene sequence 
GAGAGCGCATGTGGCCCGGTGGCTGTCGCGGTCTTCAAAACCGTTGGGCGGAGTGACGAA
CTACGCCGGTGGGTTCGACTCCCACGCGCTCTCGtgt
Downstream region at tRNA end position 
gatagacttc
Secondary structure (Cloverleaf model)
>C08002399	SeC	TCA
                   t      Gtgt gatagacttc
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G          T C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    G       G G T G       G T G G G     C
    G       | + + +                 T T
    T       C T G T
      G G          C     TGGGCGGAGTGACGAACTACGCCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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