The detailed information of tRNA gene sequence


Sequence ID>W141258919
Genome IDCBXX010000040
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesHerbaspirillum sp. RV1423 [CBXX]
Start position on genome 32970
End posion on genome 32877
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cctgcagtgt
tRNA gene sequence 
GGAGACGTGGCCGAGTGGTCGAAGGCACTTCCCTGCTAAGGAAGCATATGGGCTTAAACC
TGTATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
atgaattgtt
Secondary structure (Cloverleaf model)
>W141258919	Ser	GCT
                   t      GCCA atgaattgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CATATGGGCTTAAACCTGTATC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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