The detailed information of tRNA gene sequence


Sequence ID>C08006421
Genome IDCP000943
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesMethylobacterium sp. 4-46 [CP000943]
Start position on genome 3239300
End posion on genome 3239392
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aacccccctc
tRNA gene sequence 
GGAGGCGATCGGGGTCTGGTGGCCCTCCTGGTCTTCAAAACCAGCGGCACGCGAACAGCG
TGCGGTGGGTTCGATTCCCATCCGCCTCCGCCA
Downstream region at tRNA end position 
ggacagtgtt
Secondary structure (Cloverleaf model)
>C08006421	SeC	TCA
                   c      GCCA ggacagtgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     A   C          T T
                    T     T A C C C     A
      T C T        C      + | | | |     G
    G       G G G G       G T G G G     C
    G       | | | +                 T T
    T       C C C T
      G G          C     CGGCACGCGAACAGCGTGCG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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