The detailed information of tRNA gene sequence


Sequence ID>W141273167
Genome IDCCSC01000001
Search identical group
Phylum/ClassChlamydiota
SpeciesCandidatus Rubidus massiliensis 'Rubis' [CCSC]
Start position on genome 1358280
End posion on genome 1358194
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttcttttaC
tRNA gene sequence 
GGAAGAGTGGCAGAGTGGCCGATTGCGCCTGTCTTGAAAACAGGAGGCCTGCAAGGGTCC
GTGGGTTCGAATCCTACCTCTTCCGAaa
Downstream region at tRNA end position 
tttggtatga
Secondary structure (Cloverleaf model)
>W141273167	Ser	TGA
                   C      GAaa tttggtatga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    C       T T G C
      C G A        G     AGGCCTGCAAGGGTCC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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