The detailed information of tRNA gene sequence


Sequence ID>W141274925
Genome IDJACC01000006
Search identical group
Phylum/ClassBacteroidota
SpeciesAquimarina pacifica SW150 [JACC]
Start position on genome 11269
End posion on genome 11194
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtatctcaat
tRNA gene sequence 
GACAAGGTGGCTGAATGGTTAAGGCAATGGTCTGCAACACCATTATTTGCAGGTTCGATC
CCTGTCCTTGTCTCAA
Downstream region at tRNA end position 
taatgggagt
Secondary structure (Cloverleaf model)
>W141274925	Cys	GCA
                   t      TCAA taatgggagt
                     G - C
                     A - T
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          C T
                    T     T G T C C     A
      T A A        G      + | | | |     G
    G       G T C G       G C A G G     C
    G         + | |                 T T
    T       A G G C
      T A          A     TATTT
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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