The detailed information of tRNA gene sequence


Sequence ID>W141274945
Genome IDJACC01000037
Search identical group
Phylum/ClassBacteroidota
SpeciesAquimarina pacifica SW150 [JACC]
Start position on genome 9890
End posion on genome 9974
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atttaattta
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTAATGGAGCAGATTGCTAATCTGTCAACGCGTAAGTGTTGCC
GGGGTTCGAATCCCCGTCTCTCCGCtt
Downstream region at tRNA end position 
ttttttagaa
Secondary structure (Cloverleaf model)
>W141274945	Ser	GCT
                   a      GCtt ttttttagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G C C C C     A
        G A        G      | | | | |     G
      T     G A C C       C G G G G     C
      G       | | |                 T T
      G     A T G G
        T A        A     CAACGCGTAAGTGTTGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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