The detailed information of tRNA gene sequence


Sequence ID>W141275719
Genome IDJADF01000003
Search identical group
Phylum/ClassSpirochaetota
SpeciesBrachyspira alvinipulli ATCC 51933 [JADF]
Start position on genome 122916
End posion on genome 123003
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatataatgT
tRNA gene sequence 
GGAGAGATGCCCGAGAGGCCGAAGGGAGCAGTTTGCTAAACTGTCGTAGGTAACCCCTAC
CGCGGGTTCGAATCCCGCTCTCTCCGTat
Downstream region at tRNA end position 
tcggtttata
Secondary structure (Cloverleaf model)
>W141275719	Ser	GCT
                   T      GTat tcggtttata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G C G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        A     CGTAGGTAACCCCTACC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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