The detailed information of tRNA gene sequence


Sequence ID>W141275849
Genome IDJADI01000006
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesMannheimia haemolytica KL [JADIOO]
Start position on genome 53066
End posion on genome 52976
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tctaagatac
tRNA gene sequence 
GGATGCTTACCCAAGTGGCTGAAGGGTTCGGTCTTGAAAACCGAGAGTGGCTTAACGGTC
AGCGGGGGTTCGAATCCCTCAGCATCCGCCA
Downstream region at tRNA end position 
taaataatta
Secondary structure (Cloverleaf model)
>W141275849	Ser	TGA
                   c      GCCA taaataatta
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     C - G
                     T - A          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    G       A C C C       G G G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        T     GAGTGGCTTAACGGTCAGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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