The detailed information of tRNA gene sequence


Sequence ID>W141276016
Genome IDJADL01000021
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodospirillales bacterium URHD0088 [JADL]
Start position on genome 3978
End posion on genome 3902
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gctcgcgcta
tRNA gene sequence 
GGGCTAGTAGCTCAGTTGGTTAGAGCGCGCGCTTGATAAGCGTGAGGTCGGAGGTTCAAA
TCCTCCCTGGCCCACCA
Downstream region at tRNA end position 
cttttgcgca
Secondary structure (Cloverleaf model)
>W141276016	Ile	GAT
                   a      ACCA cttttgcgca
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     G - C          T A
                    T     C C T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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