The detailed information of tRNA gene sequence


Sequence ID>W141277946
Genome IDJAEZ01000001
Search identical group
Phylum/ClassBacteroidota
SpeciesPrevotella intermedia ATCC 25611 = DSM 20706 [JAEZ]
Start position on genome 379016
End posion on genome 378942
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagggttgat
tRNA gene sequence 
GGCGGGATAGCTCAGTTGGTTAGAGCGTCGGATTCATAATCCGGAGGTCCGGGGATCGTA
GCCCCGTCCCGCTACat
Downstream region at tRNA end position 
aaaaaggagt
Secondary structure (Cloverleaf model)
>W141277946	Met	CAT
                   t      ACat aaaaaggagt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          G A
                    T     G C C C C     T
      T G A        A      | | | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 A T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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