The detailed information of tRNA gene sequence


Sequence ID>W141278696
Genome IDJAFS01000002
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesVerrucomicrobia bacterium LP2A [JAFS]
Start position on genome 373037
End posion on genome 372965
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agattcctcc
tRNA gene sequence 
GGCAGGGTAGCTCAGCGGCAGAGCAGGGGTTTCATAAGCCCTTGGTCGAGAGTTCGATTC
TCTCCCCTGCCACgg
Downstream region at tRNA end position 
aaaagaggga
Secondary structure (Cloverleaf model)
>W141278696	Met	CAT
                   c      ACgg aaaagaggga
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T T
                    T     C T C T C     A
        G A        A      | | | | |     G
      C     C T C G       G A G A G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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