The detailed information of tRNA gene sequence


Sequence ID>W141278942
Genome IDJAFY01000005
Search identical group
Phylum/ClassSynergistota
SpeciesAminiphilus circumscriptus DSM 16581 [JAFY]
Start position on genome 427634
End posion on genome 427557
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ggcagtatgc
tRNA gene sequence 
GGGGTTGTAGCTCAGTACGGTTAGAGCGCCGGCCTGTCACGTCGGAGGTCGCGAGTTCAA
GTCTCGTCAGCCCCGCCA
Downstream region at tRNA end position 
tttttttcgc
Secondary structure (Cloverleaf model)
>W141278942	Asp	GTC
                   c      GCCA tttttttcgc
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A
                     G - C          T G
                    T     T G C T C     A
    A T G A        A      + | | | |     A
  C         C T C G       G C G A G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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