The detailed information of tRNA gene sequence


Sequence ID>W141278975
Genome IDJAFY01000007
Search identical group
Phylum/ClassSynergistota
SpeciesAminiphilus circumscriptus DSM 16581 [JAFY]
Start position on genome 977176
End posion on genome 977083
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgttttgtgc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAGGCGCTCGCCTGGAGAGCGAGTAGGCGCTCACAAAAG
TGCCTCGCGGGTTCAAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ttttttgtct
Secondary structure (Cloverleaf model)
>W141278975	Ser	GGA
                   c      GCCA ttttttgtct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     A
    G       G T C G       G C G G G     C
    G         + | |                 T T
    T       A G G C
      C G A        G     TAGGCGCTCACAAAAGTGCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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