The detailed information of tRNA gene sequence


Sequence ID>W141279173
Genome IDJAGC01000009
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesSolidesulfovibrio magneticus magneticus IFRC170 [JAGC]
Start position on genome 1227278
End posion on genome 1227371
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttttgcgaga
tRNA gene sequence 
GGAAGCGTTTCGTCACCGGTGTGGCGCCCGGACTTCAAATCCGGTGTGTGGTCGAGAGGT
CACAGGTAGGTTCGACTCCTATACGCTTCCGCCA
Downstream region at tRNA end position 
gtattggacc
Secondary structure (Cloverleaf model)
>W141279173	SeC(p)	TCA
                   a      GCCA gtattggacc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGTGTGGTCGAGAGGTCACAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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