The detailed information of tRNA gene sequence


Sequence ID>W141279773
Genome IDJAGO01000010
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesCarnimonas nigrificans ATCC BAA-78 [JAGO]
Start position on genome 385425
End posion on genome 385333
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgtacttaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATAGGGTTTATAGCT
CTATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttaagtacac
Secondary structure (Cloverleaf model)
>W141279773	Ser	GCT
                   a      GCCA ttaagtacac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGGTTTATAGCTCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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