The detailed information of tRNA gene sequence


Sequence ID>W141279797
Genome IDJAGO01000012
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesCarnimonas nigrificans ATCC BAA-78 [JAGO]
Start position on genome 321524
End posion on genome 321614
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cctcgcattc
tRNA gene sequence 
GGAGGGATGGCAGAGCGGTTGAATGCACCGGTCTTGAAAACCGGCATAGGTTAATAGCCT
ATCCAGGGTTCGAATCCCTGTCCCTCCGCCA
Downstream region at tRNA end position 
ctttttattt
Secondary structure (Cloverleaf model)
>W141279797	Ser	TGA
                   c      GCCA ctttttattt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G A C G       C A G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CATAGGTTAATAGCCTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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