The detailed information of tRNA gene sequence


Sequence ID>W141279808
Genome IDJAGO01000017
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesCarnimonas nigrificans ATCC BAA-78 [JAGO]
Start position on genome 13069
End posion on genome 13145
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cagcagccat
tRNA gene sequence 
AGGACCATAGCTCAGTTGGTTAGAGCGCCACGTTGACATCGTGGAGGTCAGCGGTTCAAA
TCCGCTTGGTCCTACCA
Downstream region at tRNA end position 
gcgcttcatg
Secondary structure (Cloverleaf model)
>W141279808	Val	GAC
                   t      ACCA gcgcttcatg
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     A - T          T A
                    T     T C G C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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