The detailed information of tRNA gene sequence


Sequence ID>W141284828
Genome IDJAME01000033
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRoseivivax isoporae LMG 25204 [JAME]
Start position on genome 683
End posion on genome 609
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
acgcgccacc
tRNA gene sequence 
GGGTGATTAGCTCAGTGGTAGAGCGCTTCGTTCACATCGAAGATGTCGGGGGTTCAAATC
CCTCATCACCCACCA
Downstream region at tRNA end position 
ttaaccccct
Secondary structure (Cloverleaf model)
>W141284828	Val	CAC
                   c      ACCA ttaaccccct
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     C T C C C     A
        G A        A      | + | | |     A
      T     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     ATGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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