The detailed information of tRNA gene sequence


Sequence ID>C08005926
Genome IDCP001013
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesLeptothrix cholodnii SP-6 [CP001013]
Start position on genome 1785328
End posion on genome 1785418
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgccctcttc
tRNA gene sequence 
GGAGACGTGACCGAGTGGCCGAAGGTGCTCCCCTGCTAAGGGAGTATGTGCCAAAAGCGC
ATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
agtatcgaaa
Secondary structure (Cloverleaf model)
>C08005926	Ser	GCT
                   c      GCCA agtatcgaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATGTGCCAAAAGCGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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