The detailed information of tRNA gene sequence


Sequence ID>W141289616
Genome IDJARI01000147
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas aeruginosa PA103 [JARI]
Start position on genome 52834
End posion on genome 52910
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcgccactc
tRNA gene sequence 
GGCTACATAGCTCAGTCGGTTAGAGCGCAGCATTCATAATGCTGATGTCCCAGGTTCAAG
TCCCGGTGTAGCCACCA
Downstream region at tRNA end position 
tatttttcaa
Secondary structure (Cloverleaf model)
>W141289616	Met	CAT
                   c      ACCA tatttttcaa
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     A - T          T G
                    T     G G C C C     A
      T G A        A      | |   | |     A
    C       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     ATGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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