The detailed information of tRNA gene sequence


Sequence ID>W141290262
Genome IDJASF01000005
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565 [JASF]
Start position on genome 53509
End posion on genome 53433
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcagcactgc
tRNA gene sequence 
GCGGTTGTAGCTCAGCTGGTTAGAGTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
CCCCGTCAACCGCGCCA
Downstream region at tRNA end position 
cttctccttt
Secondary structure (Cloverleaf model)
>W141290262	Asp	GTC
                   c      GCCA cttctccttt
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          C G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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