The detailed information of tRNA gene sequence


Sequence ID>W141290758
Genome IDJASP01000001
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesEscherichia coli O118:H16 str. 07-4255 [JASP]
Start position on genome 4004172
End posion on genome 4004248
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tcagcatcat
tRNA gene sequence 
GCGTTGTTAGCTCAGTCGGACAGAGCAATTGCCTTCTAAGCAATCGGTCAGTGGTTCGAC
TCCACTACAACGCGCCA
Downstream region at tRNA end position 
cacttatttt
Secondary structure (Cloverleaf model)
>W141290758	Arg	TCT
                   t      GCCA cacttatttt
                     G - C
                     C - G
                     G - C
                     T - A
                     T - A
                     G - C
                     T - A          T C
                    T     T C A C C     A
      T G A        A      | | | | |     G
    C       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      A C A        A     CGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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