The detailed information of tRNA gene sequence


Sequence ID>W141291540
Genome IDJASZ01000280
Search identical group
Phylum/ClassBacteroidota
SpeciesKaistella haifensis DSM 19056 [JASZ]
Start position on genome 2248
End posion on genome 2324
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccactctaat
tRNA gene sequence 
GGCGAGGTAGCTCAGTTGGTTAGAGCGCAGGATTCATAACCCTGAGGTCACGGGTTCAAT
TCCCGTCTTCGCTACAA
Downstream region at tRNA end position 
acaacgctat
Secondary structure (Cloverleaf model)
>W141291540	Met	CAT
                   t      ACAA acaacgctat
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G + T
                     G - C          T T
                    T     T G C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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