The detailed information of tRNA gene sequence


Sequence ID>C08007087
Genome IDCP001032
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesOpitutus terrae PB90-1 [CP001032]
Start position on genome 5005530
End posion on genome 5005440
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtcctgatcc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGATAGCGGCGCTTTGCTAAAGCGTTGTAGGGGTTTAAATC
CCTACCGAGGGTTCGAATCCCTCCCTCTCCGcca
Downstream region at tRNA end position 
tcctttgccc
Secondary structure (Cloverleaf model)
>C08007087	Ser	GCT
                   c      Gcca tcctttgccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G       + | | |                 T T
    T       T A G C
      C G A        G     TGTAGGGGTTTAAATCCCTACC
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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