The detailed information of tRNA gene sequence


Sequence ID>C08007088
Genome IDCP001032
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesOpitutus terrae PB90-1 [CP001032]
Start position on genome 4907884
End posion on genome 4907798
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgattccgcc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCTATTGCGGCGGTCTTGAAAACCGCTGTGGGCGCAAGCTCA
CCGGGGGTTCGAATCCCTCCCTCTCCGcca
Downstream region at tRNA end position 
tttttcgaag
Secondary structure (Cloverleaf model)
>C08007088	Ser	TGA
                   c      Gcca tttttcgaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C T A        G     TGTGGGCGCAAGCTCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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